LIFE
DPB


@
TRAP-LABS, the green branch of  
A Danish National Research Foundation Centre of Excellence
The Transport Physiology Laboratories (TRAP-labs) are focused on studying pump proteins in the biological membranes of higher plants. We are investigating the structure, function and regulation of pumps at the molecular, cellular and whole plant level. We use a combination of tools derived from molecular genetics, biochemistry, structural biology and physiology.

We host the P-type ATPase database (patbase).

Plant proton pump
(1997)

 

Plant proton pump
(2007)


Specialepladser tilbydes
Master projects

See pumps in action!
SERCA morphing movie
Group Leaders

Anja Thoe Fuglsang
Associate Professor, PhD
Rosa Lopez
 Associate Professor, PhD.
Michael G. Palmgren
 Professor, PhD, D.Sc.
Thomas Günther-Pomorski
Associate Professor, PhD.
Alexander Schulz
Professor, PhD, Dr.rer.nat.habil.
Pcovery
(in-house company for drug development against membrane protein drug targets)
Research

PUMPKIN
Section for Transport Biology
Department of Plant Biology and Biotechnology
Faculty of Life Sciences - University of Copenhagen
Teaching

Absalon - Punkt KU
Intranet
Courses at Department of Plant Biology and Biotechnology
Consortia

PHIME
FOBI
Seminars

FRIMS (Friday Morning Plant Seminars)
FNU ekstranet







About us
Localization of gene activity of the lipid pump ALA3 in roots of the model plant Arabidopsis

 Bioimaging We are developing new methods for bioimaging of plants. Check the Schulz homepage for movies of living plant cells

Specialepladser tilbydes
Master projects
Arabidopsis

P-type ATPase database, Genevestigator, RIKEN RARGE Site, Arabidopsis Membrane Protein Library, PhosPhAt (a database of phosphorylation sites in Arabidopsis), TAIR Genome Structural Annotation, TAIR BLAST, GARNet, PlantsP (blast Arabidopsis and other plant genomes), PlantsT (functional genomics of transporters), MIPS plants databases, Agrikola: Systematic RNAi knockouts in Arabidopsis, The SALK Homozygote T-DNA Collection, ATIDB: The Arabidopsis thaliana Integrated Database, CSH Genetrap Website, The Arabidopsis Gene/ORFeome Collection
Yeast

EUROSCARF, The definitive yeast transformation homepage, MIPS CYGD, Yeast phenotype catalog, SGD: Saccharomyces genome database, Yeast Global Microarray Viewer

Molecules

The DART Library, Tools for data mining, ExPASY proteomics server, SLC (solute carrier) Tables , ELM - Functional sites in proteins , Buffers, NCBI, Molecular databases, Predict Protein Server, ClustalW, BOXSHADE, Membrane protein resources, Consensus prediction of membrane protein topology (prediction of TM helices), TMHMM server (prediction of TM helices), Plant Stress....
Structures

Membrane protein structures, PDB (protein data bank) structures, AHA2 E1, SERCA1a E1, SERCA1a E2
Literature

Databases
ISI Web of Science, ISI Journal Citation Reports, Faculty of 1000: Membrane proteins

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Journals
Electronic journals online at ScienceDirect: Life sciences, Det Biovidenskabelige Fakultetsbibliotek and REX (Det Kongelige Bibliotek), Annu Rev Plant Biol, Biochemistry, Curr. Opin. Plant Biol., EMBO J., FEBS Lett., JBC, JCB, J. Cell Sci., JMB, MBC, MGG, Nature, Physiol. Plant., Planta, Plant Cell, Plant Cell Physiol., Plant J., PMB, Plant Physiol., PNAS, Science, TiBS, TiPS, ....

Den bibliometriske forskningsindikator: FIs autoritetsliste